Species databases

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Streptococcus pneumoniae

34,780 genomes

From the Global Pneumococcal Surveillance project, and other sequence collections. Used to assign global pneumococcal sequence clusters (GPSCs).

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Streptococcus pyogenes (group A Streptococcus)

2,083 genomes

Global sample from Davies et al.

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Other species

Up to 1,508 genomes

Databases for the ten species reported in the PopPUNK paper.

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